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ComparativeGenomicsToolkit
cactus
Commits
777bc3f0
Commit
777bc3f0
authored
Jun 13, 2022
by
Glenn Hickey
Browse files
fix mafcomparator to build on ubunut 20.04
parent
d6927228
Pipeline
#1756
failed with stage
in 74 minutes and 17 seconds
Changes
1
Pipelines
2
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Makefile
View file @
777bc3f0
...
...
@@ -132,7 +132,7 @@ ${versionPy}:
bin/mafComparator
:
rm
-rf
submodules/mafTools
cd
submodules
&&
git clone https://github.com/
dentearl
/mafTools.git
&&
cd
mafTools
&&
git checkout
82077ac39c9966ac8fb8efe9796fbcfb7da55477
cd
submodules
&&
git clone https://github.com/
ComparativeGenomicsToolkit
/mafTools.git
&&
cd
mafTools
&&
git checkout
cf144382b3c5a672d58a6798eebe23979c9a6b1f
cd
submodules/mafTools
&&
sed
-i
-e
's/-Werror//g'
inc/common.mk lib/Makefile
&&
sed
-i
-e
's/mafExtractor//g'
Makefile
&&
make
cp
submodules/mafTools/bin/mafComparator bin/
cd
${CWD}
/test
&&
wget
-q
https://raw.githubusercontent.com/UCSantaCruzComputationalGenomicsLab/cactusTestData/master/evolver/mammals/loci1/all.maf
-O
mammals-truth.maf
...
...
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