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ComparativeGenomicsToolkit
cactus
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This project is mirrored from
https://github.com/ComparativeGenomicsToolkit/cactus.git
. Pull mirroring updated
May 15, 2024
.
fixup-master
0948bb97
·
update version no
·
Jun 19, 2021
!522
fixing_bar_reconcilliation
d5152c0b
·
oops...
·
Jun 29, 2021
!530
cleanup_consolidated
eb31a136
·
Oops, fixing
·
Jun 29, 2021
!515
consolidated_glenn
aaefdfe5
·
add optional normalization to graphmap-join
·
Jun 30, 2021
!532
turn-off-rgfa
d2e5abed
·
turn rgfa off by default
·
Jul 01, 2021
patch-vg
69ed8631
·
move normaliztion before clipping
·
Jul 02, 2021
!536
fix_filter_trim_slowdown
c0a1e682
·
Oops, reinstating some code to fix a slow-down regression Glenn observed.
·
Jul 14, 2021
!545
graphmap-split2
537515f8
·
Revert "update to latest minimap2"
·
Jul 21, 2021
graphmap-split3
ed0b26ec
·
tone down conversion resources
·
Jul 28, 2021
!551
poa-mask
46f6658a
·
move bar mask filter to inside abpoa
·
Jul 29, 2021
clip-filter
29b5e964
·
make default recoverable chains be poa window length all the time
·
Aug 04, 2021
gitlab
9b7d29e0
·
try reverting setuptools
·
Sep 08, 2021
!576
ref-provided
5dbd9f1b
·
bypass reference phase when sequence given
·
Oct 21, 2021
!583
test-gitlab-runner
5a874068
·
Test again.
·
Nov 02, 2021
noxml
10a7e027
·
update cactus_align to new interface
·
Dec 13, 2021
graphmap-split4
bd31fbfb
·
switch back to vg release
·
Dec 21, 2021
slow-reference
d5f166f1
·
small build fixes
·
Jan 25, 2022
trigger-ci
69358ab1
·
fixing submodule hal sonLib checkout
·
Feb 04, 2022
self-loop
2647fba5
·
Fix to poa-bar self-alignment bug.
·
Feb 07, 2022
thiagogenez-bug/gcc-10
13f5738e
·
gcc-10 and above flipped a default from -fcommon to -fno-common.
·
Mar 14, 2022
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